Summary
NP_011284.1
Homolog: XP_455255.1.
Wiesman et al.[1]: Kwal_YGOB_YGL230C (K. waltii; 5e-06)
Statistics
Total Homologs: 5
Non significant structural homologs: 0
Total Synteny Homologs: 2
Found Synteny Homologs: 2
Synteny Status: Synteny homolog(s) found
Structures and Sequence Alignment
The best structural homolog was
XP_455255.1
(XP_455255.1 uncharacterized protein KLLA0_F03861g [Kluyveromyces lactis]) with a FATCAT [2] P-Value: 5.99e-04 and RMSD of 3.22 angstrom. The sequence alignment identity is 23.1%.
Structural alignment shown in left. Query protein NP_011284.1 colored as red in alignment, homolog XP_455255.1 colored as blue.
Query protein NP_011284.1 is also shown in right top, homolog XP_455255.1 showed in right bottom. They are colored based on secondary structures.
NP_011284.1 MGIITLSGNVLHLLKAYPKKGLEEVSQPEPNTANDSSTEYKGKSKDDFQMVEKSNTDERY-NF-TRTK--KWFLLMTSEYYKLMENRLL-----MFCIIA 91 XP_455255.1 MQYFTKDASMVY---TY--DGIQKT-----NAGNIKLRRLKTSSIS--RLFSRSKT-ARLRNRGTRNKQAK-FV--GSDLNKL-E-RFIYSERFMPCVI- 81 NP_011284.1 CSF-ICAIQFLFFII-YWTNIVPR--KTQRAITNL---NYD-Y-----LTAHLKEQCVPYAKILDQCIL 147 XP_455255.1 --FVICIVTLLHLILARLINMFQEMVK-YYFYANLFGMGWDWYSKWNWIVLHILEKFV----------- 136
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_003676467.1 | XP_003676467.1 hypothetical protein NCAS_0E00360 [Naumovozyma castellii CBS 4309] | 6.48e-03 | 2.60 | 3.78e-07 | True | 22.28% |
| XP_455255.1 | XP_455255.1 uncharacterized protein KLLA0_F03861g [Kluyveromyces lactis] | 5.99e-04 | 3.22 | 6.29e-07 | False | 23.08% |
| XP_453556.1 | XP_453556.1 uncharacterized protein KLLA0_D11088g [Kluyveromyces lactis] | 2.94e-02 | 2.66 | 7.82e-06 | False | 22.89% |
| Kwal_YGOB_YGL230C | Kwal_YGOB_YGL230C | 7.82e-04 | 1.73 | 3.68e-05 | True | 26.44% |
| XP_680605.1 | XP_680605.1 predicted protein [Aspergillus nidulans FGSC A4] | 8.25e-03 | 2.78 | 5.93e-04 | False | 21.26% |