Summary
NP_012177.1
Homolog: XP_003677323.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 4
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_003677323.1
(XP_003677323.1 hypothetical protein NCAS_0G00830 [Naumovozyma castellii CBS 4309]) with a FATCAT [2] P-Value: 6.23e-05 and RMSD of 3.45 angstrom. The sequence alignment identity is 22.2%.
Structural alignment shown in left. Query protein NP_012177.1 colored as red in alignment, homolog XP_003677323.1 colored as blue.
Query protein NP_012177.1 is also shown in right top, homolog XP_003677323.1 showed in right bottom. They are colored based on secondary structures.
NP_012177.1 M-QRTREL-ESSVAIDQTEVPRSRFFIMVKKLSRVADIVYIVDTFLIPPLHPLKK--QHPKV-AKFLK-VQLVFDLISLFIFATHQLLLLEDGNFGKHYF 94
XP_003677323.1 MIENTTTLRETTTTVERNEKP---LFV---KLF----VIFNISIAV---RHLLRQFLSHYKIDGPIVKHGESLWSTIEYILLLTAIVLVL------KNY- 80
NP_012177.1 KRKTKRCSKFSCSRCNANAHHPKWFKFKHSLLCLGTFCFGVYSLVKINKFFKT-------DQTVDLNRLLELFFWQ--LNAI-LNMKLFAFYG------D 178
XP_003677323.1 KLILQRCAAENCKICERLKKDP-YSSVKRFILFL-T-AFTV--LTPIIYFTVTGYIRRHPD---DYRKFIDKSSWSYWIGIIVINIDGISFCGIWISLID 172
NP_012177.1 HLESHSAP----LDVYEDSFAN-KSS--SG---G--DEV 205
XP_003677323.1 MYFKH--PFREFVQLKQDS--NSKEDLEKGLLSGKKD-- 205
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_003677323.1 | XP_003677323.1 hypothetical protein NCAS_0G00830 [Naumovozyma castellii CBS 4309] | 6.23e-05 | 3.45 | 1.54e-10 | False | 22.08% |
| XP_453542.1 | XP_453542.1 uncharacterized protein KLLA0_D10780g [Kluyveromyces lactis] | 2.92e-03 | 5.34 | 2.74e-04 | False | 25.00% |
| NP_983114.2 | NP_983114.2 ABR166Cp [Eremothecium gossypii ATCC 10895] | 2.72e-04 | 2.87 | 3.11e-04 | False | 24.05% |
| NP_986299.1 | NP_986299.1 AGL367Cp [Eremothecium gossypii ATCC 10895] | 6.83e-04 | 4.02 | 6.83e-04 | False | 19.13% |