Summary
NP_012318.1
Homolog: XP_680753.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 9
Non significant structural homologs: 2
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_680753.1
(XP_680753.1 hypothetical protein AN7484.2 [Aspergillus nidulans FGSC A4]) with a FATCAT [2] P-Value: 2.82e-12 and RMSD of 2.85 angstrom. The sequence alignment identity is 26.6%.
Structural alignment shown in left. Query protein NP_012318.1 colored as red in alignment, homolog XP_680753.1 colored as blue.
Query protein NP_012318.1 is also shown in right top, homolog XP_680753.1 showed in right bottom. They are colored based on secondary structures.
NP_012318.1 M--VESKNTELSQGTWLNK-PKSVFQEAGKVTLETDEKTDFW-----RETF-----YGFTRDSGHFLGVETGSAF-TAQVRVQGSYESLYDQAGIMVRI- 85 XP_680753.1 MAGFASAN--L-----LERVPEDEVLPA-EFTVKAPPETDIWAKPPSTERFNAPILY---KS----IPLDT---FKRARVAFSANWSQKYDQGGLIIVLN 82 NP_012318.1 -DDGH--WLKAGIEIS-D-GHAMLSSVLTNGKSDWS-TAV-YGGN------AR--D--FWLRVT--VEKGVLRIQVSSDKKTWPLVRLAPFPTSDHYLVG 166 XP_680753.1 GNSGDRKWVKTGIEFTHDKPH--LSTVAKDRWADWSLLPVPSGGTGATLEVVREPDDSLWIYLIQGVQKSPIR-EV-----TW--V-FAEEDVRDAW-IG 170 NP_012318.1 PMACTPER-GG-LKVTFSEWSLTAPLGKALHDLS--- 198 XP_680753.1 VYAARPSSAGGDLVVNFA--SLII----EVTD-STTK 200
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_680753.1 | XP_680753.1 hypothetical protein AN7484.2 [Aspergillus nidulans FGSC A4] | 2.82e-12 | 2.85 | 1.66e-32 | False | 26.58% |
| XP_680542.1 | XP_680542.1 hypothetical protein AN7273.2 [Aspergillus nidulans FGSC A4] | 6.47e-12 | 2.52 | 4.89e-30 | False | 24.73% |
| XP_657616.1 | XP_657616.1 hypothetical protein AN0012.2 [Aspergillus nidulans FGSC A4] | 4.88e-04 | 2.97 | 2.65e-14 | False | 21.85% |
| XP_681118.1 | XP_681118.1 hypothetical protein AN7849.2 [Aspergillus nidulans FGSC A4] | 3.39e-03 | 3.11 | 1.42e-07 | False | 20.34% |
| XP_680867.1 | XP_680867.1 hypothetical protein AN7598.2 [Aspergillus nidulans FGSC A4] | 2.17e-03 | 3.32 | 2.51e-07 | False | 20.13% |
| XP_502827.1 | XP_502827.1 YALI0D14564p [Yarrowia lipolytica CLIB122] | 1.69e-01 | 3.13 | 1.39e-05 | False | 25.28% |
| XP_664423.1 | XP_664423.1 hypothetical protein AN6819.2 [Aspergillus nidulans FGSC A4] | 8.85e-04 | 2.93 | 1.92e-05 | False | 22.62% |
| NP_594588.1 | NP_594588.1 putative protein CIA30 [Schizosaccharomyces pombe] | 2.25e-01 | 3.18 | 2.10e-05 | False | 21.56% |
| Kwal_14136 | Kwal_14136 | 7.70e-04 | 3.04 | 3.72e-04 | False | 13.93% |