Summary
NP_012458.1
Homolog: NP_595855.3.
Wiesman et al.[1]:
Statistics
Total Homologs: 2
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_595855.3
(NP_595855.3 uncharacterized protein SPBC18E5.14c [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 2.10e-02 and RMSD of 3.11 angstrom. The sequence alignment identity is 19.5%.
Structural alignment shown in left. Query protein NP_012458.1 colored as red in alignment, homolog NP_595855.3 colored as blue.
Query protein NP_012458.1 is also shown in right top, homolog NP_595855.3 showed in right bottom. They are colored based on secondary structures.
NP_012458.1 MHISLPT--------RNKS----------YFRIRTRT-YQIGLYHSDSSPIRDISVLHLLIATLCTIFFPIFFSLSKVQVVQWQGTTISKNCIALTMSFP 81 NP_595855.3 M-ISL-TALDLLDELLNDSSSNMIWLYEVYMLYKTYTSY---FFMSSKSFVRGVK-RYLIYFCYCANFIALF------RVI--FGT------IFV-YS-P 78 NP_012458.1 LNAI-PGM--YL--IIAFPR--LQTVIPLQRNTPVRITKSV-IVKG------AVSVPRISSPMH 131 NP_595855.3 -DGITPFMTDFVRWILIYLKGSINSLLYM-----ASFTKQISLLRGWRTEHAELS--------- 127
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_660927.1 | XP_660927.1 hypothetical protein AN3323.2 [Aspergillus nidulans FGSC A4] | 2.05e-01 | 3.09 | 3.18e-04 | False | 22.54% |
| NP_595855.3 | NP_595855.3 uncharacterized protein SPBC18E5.14c [Schizosaccharomyces pombe] | 2.10e-02 | 3.11 | 7.22e-04 | False | 20.12% |