Summary
NP_012496.1
Homolog: XP_003676781.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 12
Non significant structural homologs: 4
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_003676781.1
(XP_003676781.1 hypothetical protein NCAS_0E03540 [Naumovozyma castellii CBS 4309]) with a FATCAT [2] P-Value: 1.35e-07 and RMSD of 2.13 angstrom. The sequence alignment identity is 25.3%.
Structural alignment shown in left. Query protein NP_012496.1 colored as red in alignment, homolog XP_003676781.1 colored as blue.
Query protein NP_012496.1 is also shown in right top, homolog XP_003676781.1 showed in right bottom. They are colored based on secondary structures.
NP_012496.1 MRFQ--LF-IYFYF--TIVVIAGTNTIQQFSDAGDR----LI------TSLRNLDNNGTYET--LT-AE-KVPIIEGQIQNISAKYEQHTFILKGLEAVL 81
XP_003676781.1 MLFRTSTFAIFFLLTATITSLVG--SIWR-SDF-DRVSGKLMEMYEANTCARFL--QGGYSTDSLVDAQSSFNSLNQQLRDVKEKYSKQPAYLEVLSMVL 94
NP_012496.1 NYKVKSLD--NNERESLEIEYEKVEKALDAALNVSP---FE--YIKKFKEVSRG-K--------VVNALENLSREQNRITINGGREDEKEKEAR-EKKKR 164
XP_003676781.1 KIKVKAFEGISPLRRSAAVDMKLLSRALSFALEFNPDSDADDGY--SFKIRNQGVKNDGPADIQVAHTLASLT-ENN---FQA--AD-NDPVSRFEGHKK 185
NP_012496.1 L--DRIKRILTVSLL---ELGLAQGVADLCAVAPFACLLGVTVGSIGFIFWLALI-YNA-IQ--- 219
XP_003676781.1 LYQEGAKTFEFMALIFGACIGL-PGI--MCQL--F-MIFG--VGQL-VRFFIHLIKFSFDLEIHP 241
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| Kwal_1573 | Kwal_1573 | 1.72e-06 | 2.11 | 7.30e-23 | False | 20.75% |
| XP_003676770.1 | XP_003676770.1 hypothetical protein NCAS_0E03430 [Naumovozyma castellii CBS 4309] | 5.82e-06 | 2.55 | 3.01e-08 | False | 24.25% |
| XP_003673495.1 | XP_003673495.1 hypothetical protein NCAS_0A05540 [Naumovozyma castellii CBS 4309] | 5.53e-05 | 2.74 | 4.24e-08 | False | 18.57% |
| XP_003676781.1 | XP_003676781.1 hypothetical protein NCAS_0E03540 [Naumovozyma castellii CBS 4309] | 1.35e-07 | 2.13 | 8.34e-07 | False | 25.19% |
| XP_003673454.1 | XP_003673454.1 hypothetical protein NCAS_0A05100 [Naumovozyma castellii CBS 4309] | 5.16e-05 | 2.46 | 2.44e-06 | False | 18.18% |
| Kwal_20494 | Kwal_20494 | 1.29e-01 | 3.58 | 5.83e-06 | False | 20.43% |
| XP_453741.1 | XP_453741.1 uncharacterized protein KLLA0_D15334g [Kluyveromyces lactis] | 6.23e-02 | 2.67 | 3.44e-05 | False | 23.38% |
| XP_455183.1 | XP_455183.1 uncharacterized protein KLLA0_F02277g [Kluyveromyces lactis] | 1.96e-04 | 2.85 | 3.71e-05 | False | 22.47% |
| NP_985545.1 | NP_985545.1 AFL003Cp [Eremothecium gossypii ATCC 10895] | 2.92e-04 | 2.87 | 1.40e-04 | False | 24.55% |
| NP_982638.1 | NP_982638.1 AAR097Cp [Eremothecium gossypii ATCC 10895] | 3.07e-01 | 6.44 | 6.46e-04 | False | 21.77% |
| XP_003673065.1 | XP_003673065.1 hypothetical protein NCAS_0A01140 [Naumovozyma castellii CBS 4309] | 1.80e-04 | 3.59 | 8.32e-04 | False | 18.47% |
| NP_594900.1 | NP_594900.1 putative protein Pex22 [Schizosaccharomyces pombe] | 3.05e-01 | 3.12 | 9.26e-04 | False | 20.90% |