Summary
NP_012497.3
Homolog: XP_003676781.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 5
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_003676781.1
(XP_003676781.1 hypothetical protein NCAS_0E03540 [Naumovozyma castellii CBS 4309]) with a FATCAT [2] P-Value: 7.43e-09 and RMSD of 2.20 angstrom. The sequence alignment identity is 24.9%.
Structural alignment shown in left. Query protein NP_012497.3 colored as red in alignment, homolog XP_003676781.1 colored as blue.
Query protein NP_012497.3 is also shown in right top, homolog XP_003676781.1 showed in right bottom. They are colored based on secondary structures.
NP_012497.3 MKVQMIER--IFLIQLCLLTVVLAS---S--RAVVEFES-TGTKLV-----NS-LRVL-AAYSQSSVCVDEKIS--GIERQIEEVKDMYGNH-------S 76
XP_003676781.1 ----MLFRTSTFAI-FFLLTATITSLVGSIWRS--DFDRVSG-KLMEMYEANTCARFLQGGYSTDSL-VDAQSSFNSLNQQLRDVKEKYSKQPAYLEVLS 91
NP_012497.3 FIL----KGLNGI--LNNK--VNM--LTREIQMETVGNNTFETETG---KL-TKGLNRAVNISPFKYIKKFKTVS--T-KKFESLLNKYDLVAK-KGGEL 158
XP_003676781.1 MVLKIKVKAFEGISPLRRSAAVDMKLLSRALSFALEFNPDSDADDGYSFKIRNQGVK---NDGPAD-IQVAHTLASLTENNFQAADN--DPVSRFEG--- 182
NP_012497.3 TEEQKKKKEVLSRISRVVAATTIE-AGLAQGVVDLCITVTTSLCLVSASIGGVGFLIWLTIIYQALT---------- 224
XP_003676781.1 ---HKK----LYQ----EGAKTFEFMALIFGA---CIGLPGIMCQL-FMIFGVGQLVRF-FIH--LIKFSFDLEIHP 241
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| Kwal_1573 | Kwal_1573 | 5.13e-07 | 2.36 | 2.70e-18 | False | 23.79% |
| XP_003676770.1 | XP_003676770.1 hypothetical protein NCAS_0E03430 [Naumovozyma castellii CBS 4309] | 6.20e-07 | 2.92 | 1.07e-06 | False | 25.00% |
| XP_003676781.1 | XP_003676781.1 hypothetical protein NCAS_0E03540 [Naumovozyma castellii CBS 4309] | 7.43e-09 | 2.20 | 1.44e-05 | False | 23.91% |
| XP_003673454.1 | XP_003673454.1 hypothetical protein NCAS_0A05100 [Naumovozyma castellii CBS 4309] | 9.67e-06 | 2.21 | 7.05e-04 | False | 23.56% |
| XP_003673495.1 | XP_003673495.1 hypothetical protein NCAS_0A05540 [Naumovozyma castellii CBS 4309] | 2.58e-04 | 3.33 | 7.64e-04 | False | 23.56% |