Summary
NP_013137.1
Homolog: XP_003677323.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 13
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_003677323.1
(XP_003677323.1 hypothetical protein NCAS_0G00830 [Naumovozyma castellii CBS 4309]) with a FATCAT [2] P-Value: 1.31e-05 and RMSD of 3.04 angstrom. The sequence alignment identity is 23.9%.
Structural alignment shown in left. Query protein NP_013137.1 colored as red in alignment, homolog XP_003677323.1 colored as blue.
Query protein NP_013137.1 is also shown in right top, homolog XP_003677323.1 showed in right bottom. They are colored based on secondary structures.
NP_013137.1 -------MKEAELSATESQDEIPKSNSLLIIEKLTKAVCSL--YFINCFMVPSVDNLIEKYPKAIIIKIIDMILGAVTISLVIIVFFLYRKNGHFKNENK 91
XP_003677323.1 MIENTTTLRET--TTTVERNEKPLFVKLFVIFNISIAVRHLLRQFLSHY---KIDGPIVKHGES-LWSTIEYIL-LLT-AIVLVL-----KN--Y----K 81
NP_013137.1 TKPKRCSKVVCPSCAARKKYPKWFQLKYLLLVSMTAFS-----FYF-CT-KIRF----FFK-TDQT----------INLHRLSQLFRLQLG-WICTTALL 168
XP_003677323.1 LILQRCAAENCKICERLKKDP-YSSVKRFILF-LTAFTVLTPIIYFTVTGYIRRHPDDYRKFIDKSSWSYWIGIIVINIDGIS--F---CGIWI---SLI 171
NP_013137.1 -FYFYDALILH--SGFIEGYRCVNG-----KGAMSEGKTGQLN 203
XP_003677323.1 DMYFK-----HPFREFVQLKQDSNSKEDLEKGLLS-GKKD--- 205
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_003677323.1 | XP_003677323.1 hypothetical protein NCAS_0G00830 [Naumovozyma castellii CBS 4309] | 1.31e-05 | 3.04 | 1.06e-16 | False | 24.18% |
| XP_003677322.1 | XP_003677322.1 hypothetical protein NCAS_0G00820 [Naumovozyma castellii CBS 4309] | 4.57e-05 | 2.79 | 1.45e-14 | False | 22.63% |
| Kwal_22007 | Kwal_22007 | 5.76e-05 | 2.74 | 3.99e-10 | False | 17.89% |
| XP_003675807.1 | XP_003675807.1 hypothetical protein NCAS_0C04530 [Naumovozyma castellii CBS 4309] | 8.58e-05 | 3.19 | 1.84e-09 | False | 19.92% |
| XP_454283.1 | XP_454283.1 uncharacterized protein KLLA0_E07415g [Kluyveromyces lactis] | 6.47e-05 | 2.55 | 4.51e-08 | False | 20.88% |
| NP_985316.1 | NP_985316.1 AFL234Cp [Eremothecium gossypii ATCC 10895] | 1.92e-04 | 3.52 | 8.47e-06 | False | 22.27% |
| NP_983927.1 | NP_983927.1 ADL169Wp [Eremothecium gossypii ATCC 10895] | 4.44e-05 | 3.10 | 1.53e-05 | False | 18.29% |
| NP_001342713.1 | NP_001342713.1 putative sorting protein Vps68 [Schizosaccharomyces pombe] | 2.20e-05 | 2.95 | 2.01e-05 | False | 16.73% |
| NP_592907.2 | NP_592907.2 putative protein Vps55 [Schizosaccharomyces pombe] | 2.43e-04 | 3.29 | 3.53e-04 | False | 16.60% |
| XP_660052.1 | XP_660052.1 predicted protein [Aspergillus nidulans FGSC A4] | 1.70e-04 | 3.72 | 6.68e-04 | False | 16.25% |
| NP_986299.1 | NP_986299.1 AGL367Cp [Eremothecium gossypii ATCC 10895] | 2.01e-04 | 2.69 | 6.94e-04 | False | 21.31% |
| XP_505623.1 | XP_505623.1 YALI0F19492p [Yarrowia lipolytica CLIB122] | 2.94e-04 | 3.39 | 8.01e-04 | False | 18.97% |
| Kwal_20009 | Kwal_20009 | 3.47e-04 | 3.67 | 9.60e-04 | False | 21.64% |