Summary
NP_013519.1
Homolog: XP_501346.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 1
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_501346.1
(XP_501346.1 YALI0C01947p [Yarrowia lipolytica CLIB122]) with a FATCAT [2] P-Value: 2.03e-02 and RMSD of 2.00 angstrom. The sequence alignment identity is 17.1%.
Structural alignment shown in left. Query protein NP_013519.1 colored as red in alignment, homolog XP_501346.1 colored as blue.
Query protein NP_013519.1 is also shown in right top, homolog XP_501346.1 showed in right bottom. They are colored based on secondary structures.
NP_013519.1 MYLSAQLMRTVTASHLTLRALSTPPLFQHRQIAAVEWCGTTRPGLARQKRTQHA---SSVISK--------SGVLSAKPSSVFLALLAGKLAEKYIYARM 89 XP_501346.1 ------------------------------MLA--QRCGSLLPCQVRQKRPRLAQCMSAVLQRQRKTLIYQSGVLVSRRK------LTG--AASFAIDRT 60 NP_013519.1 LLFH--------VSVVNECPVVFHSGPV------------VWK--------------- 112 XP_501346.1 DSAHRPDGERPTFS-PNR-PWFSHQGTAGSDFKAQSEDERLWKSTKQFCREYSVSFVQ 116
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_501346.1 | XP_501346.1 YALI0C01947p [Yarrowia lipolytica CLIB122] | 2.03e-02 | 2.00 | 7.29e-04 | False | 17.09% |