Summary
NP_013659.1
Homolog: XP_681117.1.
Wiesman et al.[1]: NCAS0G03380 (S. castellii; 2E-06
Statistics
Total Homologs: 2
Non significant structural homologs: 1
Total Synteny Homologs: 2
Found Synteny Homologs: 1
Synteny Status: Synteny homolog(s) found
Structures and Sequence Alignment
The best structural homolog was
XP_681117.1
(XP_681117.1 hypothetical protein AN7848.2 [Aspergillus nidulans FGSC A4]) with a FATCAT [2] P-Value: 2.58e-02 and RMSD of 4.24 angstrom. The sequence alignment identity is 24.6%.
Structural alignment shown in left. Query protein NP_013659.1 colored as red in alignment, homolog XP_681117.1 colored as blue.
Query protein NP_013659.1 is also shown in right top, homolog XP_681117.1 showed in right bottom. They are colored based on secondary structures.
NP_013659.1 MLSYYEHNTAFQTNNCNSGSNAATTYNSDANNDTIMNKRKNDHFEFD-----THTFYQ-RSKRTKRDSVSTKFSVGSGCANLN---NNNNNIIINNNNNN 91 XP_681117.1 ---------------------MATS----APQ-TLIRRRSTDLTSPPSPPGLTPTIVNAKSKR--RHYY--KLAIAKPAADTNNSHNNNNN---NNNNNN 67 NP_013659.1 NNNNNNHNHNNSNNTAT-YNNI-HYKKNIEICPLKPVSMHHTMNSRLLN-ESEFYS-ETEEYMIHGYFGNTNRDITGTS-PTGSASIIQHQYHLLPSQSI 186 XP_681117.1 NNNNNNNNNNNNNNTDTNSNNSQDVDSNAD-------SNHNSNNDQYINTDNDVAALLT--YQKHACM---NKYLTRKFWCQNKICLLK-NFALVPASEM 154 NP_013659.1 IASQA-PGT-AMAALTNNNIANDYMDID 212 XP_681117.1 LRHYVQPSFEAQHSLS------------ 170
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_681117.1 | XP_681117.1 hypothetical protein AN7848.2 [Aspergillus nidulans FGSC A4] | 2.58e-02 | 4.24 | 1.61e-05 | False | 24.56% |
| XP_003677577.1 | XP_003677577.1 hypothetical protein NCAS_0G03380 [Naumovozyma castellii CBS 4309] | 6.52e-01 | 6.53 | 8.56e-05 | True | 28.63% |