Summary
NP_014628.1
Homolog: XP_453080.2.
Wiesman et al.[1]:
Statistics
Total Homologs: 3
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_453080.2
(XP_453080.2 uncharacterized protein KLLA0_D00209g [Kluyveromyces lactis]) with a FATCAT [2] P-Value: 3.51e-02 and RMSD of 2.67 angstrom. The sequence alignment identity is 25.5%.
Structural alignment shown in left. Query protein NP_014628.1 colored as red in alignment, homolog XP_453080.2 colored as blue.
Query protein NP_014628.1 is also shown in right top, homolog XP_453080.2 showed in right bottom. They are colored based on secondary structures.
NP_014628.1 MR-----PHHFFCGNMGVM----YTAMSGYETEDAQAYWACGRAYESAFAT---LTKKV---PGTTFSADMP-T---STWHGVLDCG-Y---SSSINVAE 77 XP_453080.2 MSLEVGGP-TLFCTEQYVLPIDSSTTL-G----DA---IRCGRSWGSRHPSDDWLPESMDISP-PIYNASAPNTDLNST-HRT--CGPYFILAGSSNI-- 85 NP_014628.1 NKSSPIDYWNCGRTYARNYALSDALS--LKPTNMLQYFLLVLFFICIIL 124 XP_453080.2 ---TLLQAWQCG-VLAGNRATSSS-SNVVKTPHLLYLMILIAYFV---- 125
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_451523.2 | XP_451523.2 uncharacterized protein KLLA0_A12001g [Kluyveromyces lactis] | 1.94e-01 | 2.15 | 9.33e-20 | False | 25.00% |
| XP_451539.1 | XP_451539.1 uncharacterized protein KLLA0_B00220g [Kluyveromyces lactis] | 4.45e-02 | 3.21 | 1.17e-05 | False | 25.68% |
| XP_453080.2 | XP_453080.2 uncharacterized protein KLLA0_D00209g [Kluyveromyces lactis] | 3.51e-02 | 2.67 | 1.17e-05 | False | 25.68% |