Summary
NP_014927.3
Homolog: XP_003674899.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 1
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_003674899.1
(XP_003674899.1 hypothetical protein NCAS_0B04430 [Naumovozyma castellii CBS 4309]) with a FATCAT [2] P-Value: 4.59e-02 and RMSD of 2.63 angstrom. The sequence alignment identity is 21.2%.
Structural alignment shown in left. Query protein NP_014927.3 colored as red in alignment, homolog XP_003674899.1 colored as blue.
Query protein NP_014927.3 is also shown in right top, homolog XP_003674899.1 showed in right bottom. They are colored based on secondary structures.
NP_014927.3 MQQTKFGKMYLD--HDSV-VEYSEDEIVEADRITLGYKKRLSMIENQMRHLLEDFSLDVQQIEPILADLQKYYDAFL-QLLQ--KRNKSLQCKRSTHQPV 94
XP_003674899.1 --------M-LDAEHSPAGTTSSSNEYGAA--VT-------SMVEPSFYDQL----MAVMKAE--IPEVTK--KAIIDKLINYAKATTDTS-KFKTKEEI 73
NP_014927.3 -PSPMNS-QTSTNA-KVNLSGKLMKFQLNS-VQKFDEENI-LRI-LQNKIEFEHYFQIDKGKKQKVLLLAVYQCLN--GPT-RLHKVLNIEGIIHNNSIR 185
XP_003674899.1 FEEDFRSIKDDLHAFKTKISG----FSENKMIMKTWAHNIRLRVPLP-K-RF-------KG-NQAIRLLS--EVLNDYAQTWFLDKFLDRE-----NYAK 152
NP_014927.3 TILGKQVSSSKWTVFLYDV--KLVLLAHRQDVPNLETSKMIVRYGDLFPCALYFKDHTAY 243
XP_003674899.1 ----KD-----FNFFLNEIVRKFEV----YDKPAVPNRKLL------------------- 180
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_003674899.1 | XP_003674899.1 hypothetical protein NCAS_0B04430 [Naumovozyma castellii CBS 4309] | 4.59e-02 | 2.63 | 4.28e-04 | False | 21.15% |