Summary
NP_015132.1
Homolog: XP_503563.1.
Wiesman et al.[1]: Kwal_27.12107 (K. waltii; 6E-07)
Statistics
Total Homologs: 4
Non significant structural homologs: 1
Total Synteny Homologs: 3
Found Synteny Homologs: 3
Synteny Status: Synteny homolog(s) found
Structures and Sequence Alignment
The best structural homolog was
XP_503563.1
(XP_503563.1 YALI0E04961p [Yarrowia lipolytica CLIB122]) with a FATCAT [2] P-Value: 3.36e-03 and RMSD of 2.41 angstrom. The sequence alignment identity is 16.8%.
Structural alignment shown in left. Query protein NP_015132.1 colored as red in alignment, homolog XP_503563.1 colored as blue.
Query protein NP_015132.1 is also shown in right top, homolog XP_503563.1 showed in right bottom. They are colored based on secondary structures.
NP_015132.1 ------------------------------------------------------------------MTAMKEDNAALITLKKNNDQEKLRVHKLTDASSN 34 XP_503563.1 MSLEESWIDVDQKVTVKPPARYSARMPNVEALETESSALFYHAPSVYIIESDAEEDDEYNCDSRDETT---DDRTLLFSRDSRNSPSS-R-DSTTTTTSI 95 NP_015132.1 SA--DGF--VINK-AKN----GGPLNK--KSL-VNN-----EQHIKK--AVSPGRVRKHKTTTSSTKSRTK-SKKKDASESKVQRENKG----SF-YQGA 109 XP_503563.1 AALQDSLSTIVSRDMKQARACGSSRSKPPSSVCLDSLRIVPESQLPKMRARGSGTVAPAMSSTDS-DSDTKMAVKK----RRVKRVRTGVSSPSMEVSGA 190 NP_015132.1 IFGS------F----LGAAVTTV-LS---NLAV--KALQN---- 133 XP_503563.1 --GSPGGTGGFSPAALAAGITIIGLSFSAGYAIGRQSLRTASVN 232
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_001342276.1 | NP_001342276.1 AFL072C-Ap [Eremothecium gossypii ATCC 10895] | 7.68e-02 | 6.21 | 2.73e-17 | True | 23.81% |
| XP_454825.1 | XP_454825.1 uncharacterized protein KLLA0_E19317g [Kluyveromyces lactis] | 7.04e-03 | 2.98 | 2.90e-14 | True | 25.16% |
| Kwal_56.23964 | Kwal_56.23964 | 4.97e-03 | 2.67 | 3.06e-10 | True | 28.29% |
| XP_503563.1 | XP_503563.1 YALI0E04961p [Yarrowia lipolytica CLIB122] | 3.36e-03 | 2.41 | 3.59e-06 | False | 16.80% |