Summary
NP_065437.1
Homolog: XP_504202.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 4
Non significant structural homologs: 2
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_504202.1
(XP_504202.1 YALI0E20779p [Yarrowia lipolytica CLIB122]) with a FATCAT [2] P-Value: 2.93e-03 and RMSD of 2.02 angstrom. The sequence alignment identity is 26.9%.
Structural alignment shown in left. Query protein NP_065437.1 colored as red in alignment, homolog XP_504202.1 colored as blue.
Query protein NP_065437.1 is also shown in right top, homolog XP_504202.1 showed in right bottom. They are colored based on secondary structures.
NP_065437.1 MVLTDAEELRSP---VITS-DMSF--F--DL---ESNHSSDSVHLLCEKYT----HKLPIES---ESQ-TTFRLAPTKQRLYRQSTLYVPLSLKQRVFLF 81 XP_504202.1 M---DSAEF-YPEYNALNNHD-SFPDWEEDLPVTEFNQKN-----LSE-YTRFQNRKFEAETAEWERHLRAFHNTPTSSPTY----LYFCMMIS-----F 80 NP_065437.1 TERVKSIWAGLPRCKPNKYFKVAFALAVLTPLAIWIFYIDFRVH- 125 XP_504202.1 TMLV-----GL-R----SY--LGIALGLL-EVA--IVYIAARYQL 110
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_595600.1 | NP_595600.1 putative beta-glucan synthesis-associated protein [Schizosaccharomyces pombe] | 1.14e-01 | 3.08 | 1.64e-06 | False | 21.65% |
| XP_504202.1 | XP_504202.1 YALI0E20779p [Yarrowia lipolytica CLIB122] | 2.93e-03 | 2.02 | 1.04e-04 | False | 26.90% |
| Kwal_21828 | Kwal_21828 | 1.10e-01 | 3.08 | 2.99e-04 | False | 15.02% |
| XP_453115.1 | XP_453115.1 uncharacterized protein KLLA0_D01001g [Kluyveromyces lactis] | 1.93e-02 | 2.15 | 7.36e-04 | False | 14.52% |