Summary
NP_076884.1
Homolog: XP_504173.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 2
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_504173.1
(XP_504173.1 YALI0E20097p [Yarrowia lipolytica CLIB122]) with a FATCAT [2] P-Value: 1.95e-04 and RMSD of 2.36 angstrom. The sequence alignment identity is 26.4%.
Structural alignment shown in left. Query protein NP_076884.1 colored as red in alignment, homolog XP_504173.1 colored as blue.
Query protein NP_076884.1 is also shown in right top, homolog XP_504173.1 showed in right bottom. They are colored based on secondary structures.
NP_076884.1 MYNQIINTF---IDDC-LFLQTPMLQSPISSKIVLS--FFL----RNFFPSLF 43 XP_504173.1 M-TALTN-FRRIIAQAELF----RLSSTDSSSLHRSGRSFLQGSQRS------ 41
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_504173.1 | XP_504173.1 YALI0E20097p [Yarrowia lipolytica CLIB122] | 1.95e-04 | 2.36 | 1.13e-04 | False | 26.42% |
| XP_002999437.1 | XP_002999437.1 uncharacterized protein KLLA0_F20603g [Kluyveromyces lactis] | 2.75e-01 | 2.32 | 6.84e-04 | False | 18.75% |