Summary
NP_116682.3
Homolog: XP_003674985.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 27
Non significant structural homologs: 26
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_003674985.1
(XP_003674985.1 hypothetical protein NCAS_0B05290 [Naumovozyma castellii CBS 4309]) with a FATCAT [2] P-Value: 3.38e-02 and RMSD of 1.48 angstrom. The sequence alignment identity is 22.6%.
Structural alignment shown in left. Query protein NP_116682.3 colored as red in alignment, homolog XP_003674985.1 colored as blue.
Query protein NP_116682.3 is also shown in right top, homolog XP_003674985.1 showed in right bottom. They are colored based on secondary structures.
NP_116682.3 M--T-PYAVAITVALLIVTVSALQVNNSCVAFPPSNLRGKNGDGTNEQYA--TALLSIPWNGPPESLRDI--NLIELEPQVALYLLENYINHYY-NTTRD 92
XP_003674985.1 MKFTLKYFI---VSLLTLTTHFVFADPS-LETPPTDIV-K--ERT-PQFPWYTAMATV-LRG-----RYVYAN---VEPPT--W--ANLV--WWAGLTAD 77
NP_116682.3 NKCPNNHYLMGGQLGSSSDNRSLNDPQTM---LWPEKKEDEKNCQE--TFKGACSCTK--RFCK-GYFSVNIFGI----NL---NISYSSGK--- 169
XP_003674985.1 D---------GGLLDTWED---LESAYNFCNGLW-DKHE---ICIESST-KAMKSVVQILIMCLIGWYSTTFVAVIRDTNLNKKNLQARQAKKQQ 155
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_588120.1 | NP_588120.1 protein mug117 [Schizosaccharomyces pombe] | 5.87e-01 | 4.08 | 2.97e-08 | False | 19.23% |
| NP_587674.1 | NP_587674.1 uncharacterized protein SPCP20C8.02c [Schizosaccharomyces pombe] | 3.97e-01 | 4.04 | 5.37e-08 | False | 20.22% |
| XP_660406.1 | XP_660406.1 predicted protein [Aspergillus nidulans FGSC A4] | 2.00e-01 | 2.40 | 7.01e-07 | False | 21.03% |
| NP_592934.1 | NP_592934.1 protein mug121 [Schizosaccharomyces pombe] | 1.21e-01 | 3.49 | 7.77e-07 | False | 24.54% |
| XP_003677761.1 | XP_003677761.1 hypothetical protein NCAS_0H01020 [Naumovozyma castellii CBS 4309] | 6.04e-01 | 2.78 | 5.35e-06 | False | 19.40% |
| XP_681363.1 | XP_681363.1 predicted protein [Aspergillus nidulans FGSC A4] | 5.02e-02 | 2.72 | 5.84e-06 | False | 22.38% |
| XP_003678411.1 | XP_003678411.1 hypothetical protein NCAS_0J00930 [Naumovozyma castellii CBS 4309] | 8.80e-02 | 1.88 | 1.18e-05 | False | 21.48% |
| XP_680678.1 | XP_680678.1 predicted protein [Aspergillus nidulans FGSC A4] | 3.23e-01 | 2.86 | 1.38e-05 | False | 21.05% |
| XP_680729.1 | XP_680729.1 predicted protein [Aspergillus nidulans FGSC A4] | 6.43e-02 | 2.91 | 1.38e-05 | False | 18.80% |
| NP_986301.1 | NP_986301.1 AGL366Cp [Eremothecium gossypii ATCC 10895] | 5.11e-01 | 3.39 | 1.61e-05 | False | 13.09% |
| NP_588571.1 | NP_588571.1 uncharacterized protein SPCC569.02c [Schizosaccharomyces pombe] | 5.22e-01 | 4.43 | 2.70e-05 | False | 19.58% |
| XP_500038.1 | XP_500038.1 YALI0A13497p [Yarrowia lipolytica CLIB122] | 6.39e-01 | 3.44 | 3.32e-05 | False | 21.50% |
| Kwal_741 | Kwal_741 | 6.28e-01 | 4.61 | 4.18e-05 | False | 21.12% |
| XP_663000.1 | XP_663000.1 predicted protein [Aspergillus nidulans FGSC A4] | 8.62e-01 | 3.49 | 4.64e-05 | False | 19.82% |
| NP_592789.1 | NP_592789.1 uncharacterized protein SPAPJ695.01c [Schizosaccharomyces pombe] | 2.66e-01 | 2.80 | 5.82e-05 | False | 16.58% |
| XP_682321.1 | XP_682321.1 hypothetical protein AN9052.2 [Aspergillus nidulans FGSC A4] | 4.93e-01 | 4.11 | 1.54e-04 | False | 22.75% |
| XP_681534.1 | XP_681534.1 predicted protein [Aspergillus nidulans FGSC A4] | 6.95e-01 | 4.36 | 1.66e-04 | False | 21.05% |
| NP_982972.1 | NP_982972.1 ABR026Cp [Eremothecium gossypii ATCC 10895] | 7.32e-01 | 4.15 | 2.04e-04 | False | 18.84% |
| XP_499724.1 | XP_499724.1 YALI0A03421p [Yarrowia lipolytica CLIB122] | 6.88e-01 | 3.70 | 2.49e-04 | False | 23.67% |
| XP_661118.1 | XP_661118.1 predicted protein [Aspergillus nidulans FGSC A4] | 2.67e-01 | 3.32 | 2.89e-04 | False | 22.04% |
| XP_664706.1 | XP_664706.1 hypothetical protein AN7102.2 [Aspergillus nidulans FGSC A4] | 6.83e-01 | 4.18 | 3.28e-04 | False | 20.48% |
| XP_664276.1 | XP_664276.1 predicted protein [Aspergillus nidulans FGSC A4] | 8.01e-01 | 3.35 | 3.58e-04 | False | 17.11% |
| NP_985486.1 | NP_985486.1 AFL062Wp [Eremothecium gossypii ATCC 10895] | 2.08e-01 | 2.41 | 5.94e-04 | False | 19.46% |
| XP_657966.1 | XP_657966.1 hypothetical protein AN0362.2 [Aspergillus nidulans FGSC A4] | 8.58e-01 | 4.22 | 7.92e-04 | False | 18.26% |
| XP_003674985.1 | XP_003674985.1 hypothetical protein NCAS_0B05290 [Naumovozyma castellii CBS 4309] | 3.38e-02 | 1.48 | 8.15e-04 | False | 22.56% |
| XP_499856.1 | XP_499856.1 YALI0A07865p [Yarrowia lipolytica CLIB122] | 4.68e-01 | 3.97 | 8.80e-04 | False | 22.17% |
| XP_501849.1 | XP_501849.1 YALI0C15004p [Yarrowia lipolytica CLIB122] | 3.18e-01 | 3.33 | 9.41e-04 | False | 22.17% |