Summary
NP_878070.1
Homolog: NP_593433.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 2
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_593433.1
(NP_593433.1 uncharacterized protein SPAC343.20 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 1.72e-02 and RMSD of 2.14 angstrom. The sequence alignment identity is 23.5%.
Structural alignment shown in left. Query protein NP_878070.1 colored as red in alignment, homolog NP_593433.1 colored as blue.
Query protein NP_878070.1 is also shown in right top, homolog NP_593433.1 showed in right bottom. They are colored based on secondary structures.
NP_878070.1 ----MAHLSLN------QY-KCTHIIMH-GT--CLSGLYPVPFTHKAHDYPHFNIYISFGGPKYC----IT--ALN-T-------YV-IPLFH-HLLSTQ 70 NP_593433.1 MKVTMLPLQLNDEINSASFGPASSSTSHSSTIFCVH--------HRVR-Y----IYV----PRHCLLRSLTYATTNFTKFSKFVYYLAITL-HTSLL-TK 81 NP_878070.1 FIYTYVNITKKSPLKSPKHKNILSFN----DNT--- 99 NP_593433.1 LIYCHADL---YALQSIKYKR-LRINNGMLDSPKRE 113
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_001342886.1 | NP_001342886.1 uncharacterized protein SPCC191.06 [Schizosaccharomyces pombe] | 6.00e-02 | 2.48 | 2.54e-06 | False | 22.08% |
| NP_593433.1 | NP_593433.1 uncharacterized protein SPAC343.20 [Schizosaccharomyces pombe] | 1.72e-02 | 2.14 | 8.23e-04 | False | 24.26% |