Summary
NP_878165.1
Homolog: XP_003676740.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 3
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_003676740.1
(XP_003676740.1 hypothetical protein NCAS_0E03130 [Naumovozyma castellii CBS 4309]) with a FATCAT [2] P-Value: 2.12e-05 and RMSD of 1.59 angstrom. The sequence alignment identity is 16.1%.
Structural alignment shown in left. Query protein NP_878165.1 colored as red in alignment, homolog XP_003676740.1 colored as blue.
Query protein NP_878165.1 is also shown in right top, homolog XP_003676740.1 showed in right bottom. They are colored based on secondary structures.
NP_878165.1 MSNTFVAVEFSWLYAISLILPCETIRVAWAPKRAY--HGTSEEKRRLAPADI---- 50
XP_003676740.1 MQ------DFS-VF-ISVF---AFFFIFY-----YGAHSVTINKNKF---DVPNLI 37
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_003676740.1 | XP_003676740.1 hypothetical protein NCAS_0E03130 [Naumovozyma castellii CBS 4309] | 2.12e-05 | 1.59 | 4.62e-09 | False | 16.07% |
| Kwal_14620 | Kwal_14620 | 2.53e-04 | 2.44 | 4.91e-08 | False | 14.52% |
| Kwal_13579 | Kwal_13579 | 2.82e-03 | 2.23 | 4.21e-06 | False | 18.42% |